ncRNA ID | novel_vvi_miR577 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:24560629-24560718 [-] |
Reference genome | 12X |
Source | SRR1528357;SRR1528369;SRR1528370;SRR1528371;SRR1528375;SRR1528376;SRR1528387;SRR1528405;SRR1528407;SRR1528409;SRR1528410;SRR1528414 |
Length | 22 |
Mature sequence(if miRNA) | 69 - CUGAACUCUCUCCCUCAUGGCC - 90 |
Stem-loop(if miRNA) |
--         CU     A    C     A      A   GAAUG  U   CUGAACUCU  CCCUC UGGC UUUCU AGCUUU UCC     UC U   |||||||||  ||||| |||| ||||| |||||| |||     ||   GACUUGAGG  GGGAG ACCG AAGGG UCGAAG AGG     AG A UA         -U     A    -     G      -   ---AA  A |
Stem-loop sequence | CUGAACUCUCUCCCUCAUGGCCUUUCUAAGCUUUAUCCGAAUGUCUUAAGAAAGGAGAAGCUGGGGAAGCCAAGAGGGUGGAGUUCAGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002267502.3 |
|
3.0 | PREDICTED: Vitis vinifera scarecrow-like protein 21 (LOC100256348), mRNA | NA | coding protein | psRNATarget |