Search result

BaseInfo

ncRNA ID lus-miR396c
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UUCCACAGCUUUCUUGAACUG - NA
Stem-loop(if miRNA)    U   C  U    C            C              UA    U       UUA
GCC CUG UU UAUC UUCCACAGCUUU UUGAACUGCAUAUA  UAUA AUGCGAA   G
||| ||| || |||| |||||||||||| ||||||||||||||  |||| |||||||
CGG GAC AA AUAG AGGGUGUCGAAA AACUUGGCGUGUGU  AUAU UAUGUUU   G
   -   U  C    A            U              UA    -       UUG
Stem-loop sequence GCCUCUGCUUUUAUCCUUCCACAGCUUUCUUGAACUGCAUAUAUAUAUAUAUGCGAAUUAGGGUUUUUGUAUUAUAAUUGUGUGCGGUUCAAUAAAGCUGUGGGAAGAUACAAUCAGGGC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).