ncRNA ID | novel_vvi_miR570 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:9727305-9727356 [+] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGAAUUCAAGGAACUCGUCUCUU - 24 |
Stem-loop(if miRNA) |
--AGGA        -          U       AUUCAAGG AACUCGUCUC U       |||||||| |||||||||| G       UGAGUUCC UUGAGCAGAG A GGUAAA        C          A |
Stem-loop sequence | AGGAAUUCAAGGAACUCGUCUCUUGAAGAGACGAGUUCCCUUGAGUAAAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019225700.1 |
|
3.0 | PREDICTED: Vitis vinifera protein transport protein SEC16B homolog (LOC100251258), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010663016.2 |
|
3.0 | PREDICTED: Vitis vinifera protein transport protein SEC16B homolog (LOC100251258), transcript variant X1, mRNA | NA | coding protein | psRNATarget |