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BaseInfo

ncRNA ID	novel_vvi_miR567
Species	Vitis vinifera
Class	miRNA
Genome position	Chr13:8830227-8830276 [+]
Reference genome	12X
Source	SRR1528357
Length	24
Mature sequence(if miRNA)	27 - CAAAGCAGACAAUAUCUACACGGU - 50
Stem-loop(if miRNA)	--U              CA     G    GUGUAGAUAUUGUC  CUUUG G    ||||||||||||||  |||||    CACAUCUAUAACAG  GAAAC U UGG              AC     C
Stem-loop sequence	UGUGUAGAUAUUGUCCACUUUGGGUCCAAAGCAGACAAUAUCUACACGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA153270.1	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   ||=|*||=|||||||||||||||| targets:1898   ACUGGGUGGAUAUUGUCUGCUUUG   1921 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_10460_Transcript_5/10_Confidence_0.400.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA153271.1	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   ||=|*||=|||||||||||||||| targets:2023   ACUGGGUGGAUAUUGUCUGCUUUG   2046 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_10460_Transcript_6/10_Confidence_0.440.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA140367.1	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   |=|||||||||||||||||||*|| targets:1820   AUCGUGUAGAUAUUGUCUGCUCUG   1843 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_2482_Transcript_7/10_Confidence_0.385.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA152016.1	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   |=|*|||||||||||||*|||||| targets:954   AUCAUGUAGAUAUUGUCCGCUUUG   977 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_501_Transcript_7/10_Confidence_0.553.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA152015.1	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   |=|*|||||||||||||*|||||| targets:954   AUCAUGUAGAUAUUGUCCGCUUUG   977 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_501_Transcript_3/10_Confidence_0.553.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002273575.3	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   |==|||||*||||||||*|||||| targets:2197   AUUGUGUAAAUAUUGUCCGCUUUG   2220 Target Full Sequence	2.5	PREDICTED: Vitis vinifera DUF21 domain-containing protein At5g52790 (LOC100256110), mRNA	NA	coding protein	psRNATarget
KA160411.1	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   ||---||=|||||||||||=|||| targets:1142   AC---GUGGAUAUUGUCUGUUUUG   1162 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_13463_Transcript_3/4_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA150265.1	ncRNA:24   UGGCACAUCUAUAACAGACGAAAC   1   *|=*||||||*||||||||*|||| targets:57   UCUUUGUAGACAUUGUCUGAUUUG   80 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_19985_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget