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BaseInfo

ncRNA ID novel_vvi_miR566
Species Vitis vinifera
Class miRNA
Genome position Chr1:9032537-9032682 [-]
Reference genome 12X
Source SRR1528357
Length 25
Mature sequence(if miRNA) 1 - AAACGAGCUCUUAGAACCUGUUUGG - 25
Stem-loop(if miRNA) --       C   U     G          A     C     A G        U         C     UAAU
  AAACGGG UUU AGAGU UGUUUGGUAG GAUUC AGGAA C UUUUUAGC UUUUUAACA UUGAA    A
  ||||||| ||| ||||| |||||||||| ||||| ||||| | |||||||| ||||||||| |||||    A
  UUUGUCC AGA UCUCG GCAAACCAUC CUAAG UUUUU G AAAGAUUG AAAGAUUGU AACUU    A
GG       A   U     A          A     A     C -        U         A     UUUA
Stem-loop sequence AAACGGGCUUUUAGAGUGUGUUUGGUAGAGAUUCCAGGAAACGUUUUUAGCUUUUUUAACACUUGAAUAAUAAAAUUUUUCAAAUGUUAGAAAUGUUAGAAAGCUUUUUAGAAUCACUACCAAACGAGCUCUUAGAACCUGUUUGG