ncRNA ID | novel_vvi_miR565 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr1:9841066-9841205 [-] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUAGAUAACUCACUAGCACAAUG - 24 |
Stem-loop(if miRNA) |
--        A       U      CAA        AA                       CACCACACC   UUGUGUUA GUGAGUU UUUGCU   CGUUUUAA  ACUCGCAAAUGUGGAAUUUGAUA         C   |||||||| ||||||| ||||||   ||||||||  |||||||||||||||||||||||         U   AACACGAU CACUCAA AGAUGA   GUAAAGUU  UGAGUGUUUACAUCUUAAACUAU         U GU        -       U      UUC        AC                       AACAGAACA |
Stem-loop sequence | UUGUGUUAAGUGAGUUUUUUGCUCAACGUUUUAAAAACUCGCAAAUGUGGAAUUUGAUACACCACACCCUUACAAGACAAUAUCAAAUUCUACAUUUGUGAGUCAUUGAAAUGCUUAGUAGAUAACUCACUAGCACAAUG |