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BaseInfo

ncRNA ID lus-miR396b
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UUCCACAGCUUUCUUGAACUU - NA
Stem-loop(if miRNA)      CU        -----C    CUA                 A        AUAUC    CUCG UUAGCCCUUUUCCACCCUCAAUUG
UCAGA  AGUCCUGG      CAUG   UUCCACAGCUUUCUUGA CUUUCCUA     UAUA    A                        U
|||||  ||||||||      ||||   ||||||||||||||||| ||||||||     ||||    |
AGUUU  UCAGGACU      GUAC   AGGGUGUCGAAAGAACU GAGAGGGU     ACCU    U                        G
     -U        UUCACC    CAG                 C        -----    ---- UACGAGGUAUAAUAUAUAUAUUCG
Stem-loop sequence UCAGACUAGUCCUGGCCAUGCUAUUCCACAGCUUUCUUGAACUUUCCUAAUAUCUAUACUCGAUUAGCCCUUUUCCACCCUCAAUUGUGGCUUAUAUAUAUAAUAUGGAGCAUUUCCAUGGGAGAGCUCAAGAAAGCUGUGGGAGACCAUGCCACUUUCAGGACUUUUUGA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).