ncRNA ID | lus-miR396b |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UUCCACAGCUUUCUUGAACUU - NA |
Stem-loop(if miRNA) |
     CU        -----C    CUA                 A        AUAUC    CUCG UUAGCCCUUUUCCACCCUCAAUUG UCAGA  AGUCCUGG      CAUG   UUCCACAGCUUUCUUGA CUUUCCUA     UAUA    A                        U |||||  ||||||||      ||||   ||||||||||||||||| ||||||||     ||||    | AGUUU  UCAGGACU      GUAC   AGGGUGUCGAAAGAACU GAGAGGGU     ACCU    U                        G      -U        UUCACC    CAG                 C        -----    ---- UACGAGGUAUAAUAUAUAUAUUCG |
Stem-loop sequence | UCAGACUAGUCCUGGCCAUGCUAUUCCACAGCUUUCUUGAACUUUCCUAAUAUCUAUACUCGAUUAGCCCUUUUCCACCCUCAAUUGUGGCUUAUAUAUAUAAUAUGGAGCAUUUCCAUGGGAGAGCUCAAGAAAGCUGUGGGAGACCAUGCCACUUUCAGGACUUUUUGA |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |