Search result

BaseInfo

ncRNA ID novel_vvi_miR562
Species Vitis vinifera
Class miRNA
Genome position Chr13:19300408-19300556 [+]
Reference genome 12X
Source SRR1528357
Length 23
Mature sequence(if miRNA) 1 - AAUUCCUCAACCGGUAGGCACUG - 23
Stem-loop(if miRNA) --                 G  -     A       -CA   A        UACCAG  G              GA
  AAUUCCUCAACCGGUAG CA CUGGU AAAAAAA   UCA CCGGUUGA      UU CUCAACCGGUUGAG  A
  ||||||||||||||||| || ||||| |||||||   ||| ||||||||      || ||||||||||||||  A
  UUAAGGAGUUGGCCAUC GU GACCA UUUUUUU   AGU GGCCAACU      AA GAGUUGGCCAACUC  U
UU                 -  U     A       AUG   G        -CUUUA  G              GG
Stem-loop sequence AAUUCCUCAACCGGUAGGCACUGGUAAAAAAAACAUCAACCGGUUGAUACCAGUUGCUCAACCGGUUGAGGAAAUGGCUCAACCGGUUGAGGAAAUUUCUCAACCGGGUGAGUAUUUUUUUAACCAGUUGCUACCGGUUGAGGAAUUUU