ncRNA ID | novel_vvi_miR562 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:19300408-19300556 [+] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAUUCCUCAACCGGUAGGCACUG - 23 |
Stem-loop(if miRNA) |
--                 G  -     A       -CA   A        UACCAG  G              GA   AAUUCCUCAACCGGUAG CA CUGGU AAAAAAA   UCA CCGGUUGA      UU CUCAACCGGUUGAG  A   ||||||||||||||||| || ||||| |||||||   ||| ||||||||      || ||||||||||||||  A   UUAAGGAGUUGGCCAUC GU GACCA UUUUUUU   AGU GGCCAACU      AA GAGUUGGCCAACUC  U UU                 -  U     A       AUG   G        -CUUUA  G              GG |
Stem-loop sequence | AAUUCCUCAACCGGUAGGCACUGGUAAAAAAAACAUCAACCGGUUGAUACCAGUUGCUCAACCGGUUGAGGAAAUGGCUCAACCGGUUGAGGAAAUUUCUCAACCGGGUGAGUAUUUUUUUAACCAGUUGCUACCGGUUGAGGAAUUUU |