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BaseInfo

ncRNA ID	novel_vvi_miR561
Species	Vitis vinifera
Class	miRNA
Genome position	Chr1:17936301-17936375 [-]
Reference genome	12X
Source	SRR1528357
Length	20
Mature sequence(if miRNA)	1 - UAUGUUGGACAAUGUCAACA - 20
Stem-loop(if miRNA)	--UUA    C                  A     AUU      ACAU GUCCAACAUAAUUGAAGU AACUU   A      |||| |||||||||||||||||| |||||   U      UGUA CAGGUUGUAUUGAUUUCA UUGGA   C ACAAC    A                  C     CAA
Stem-loop sequence	UUAACAUCGUCCAACAUAAUUGAAGUAAACUUAUUAUCAACAGGUUCACUUUAGUUAUGUUGGACAAUGUCAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA144424.1	ncRNA:20   ACAACUGUAACAGGUUGUAU   1   ||||||*|||*||||||||| targets:1326   UGUUGAAAUUCUCCAACAUA   1345 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12789_Transcript_4/4_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA144421.1	ncRNA:20   ACAACUGUAACAGGUUGUAU   1   ||||||*|||*||||||||| targets:1353   UGUUGAAAUUCUCCAACAUA   1372 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12789_Transcript_1/4_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA144422.1	ncRNA:20   ACAACUGUAACAGGUUGUAU   1   ||||||*|||*||||||||| targets:1405   UGUUGAAAUUCUCCAACAUA   1424 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12789_Transcript_2/4_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA144423.1	ncRNA:20   ACAACUGUAACAGGUUGUAU   1   ||||||*|||*||||||||| targets:1590   UGUUGAAAUUCUCCAACAUA   1609 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12789_Transcript_3/4_Confidence_0.700.Vivi mRNA sequence	NA	coding protein	psRNATarget