ncRNA ID | novel_vvi_miR558 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:4949286-4949434 [-] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 23 |
Mature sequence(if miRNA) | 127 - AAUUCCUCAACCGGUAGGCACUG - 149 |
Stem-loop(if miRNA) |
--                  C      --CA    A  A   A        UACCAG  G              GA   AAUUCCUCAACCGGUAGG ACUGGU    AAAA AC UCA CCGGUUGA      UU CUCAACCGGUUGAG  A   |||||||||||||||||| ||||||    |||| || ||| ||||||||      || ||||||||||||||  A   UUAAGGAGUUGGCCAUCU UGACCA    UUUU UG AGU GGCCAACU      AA GAGUUGGCCAACUC  U UU                  U      AUUG    A  -   G        -CUUUA  G              GG |
Stem-loop sequence | AAUUCCUCAACCGGUAGGCACUGGUCAAAAAAACAUCAACCGGUUGAUACCAGUUGCUCAACCGGUUGAGGAAAUGGCUCAACCGGUUGAGGAAAUUUCUCAACCGGGUGAGUAUUUUGUUAACCAGUUUCUACCGGUUGAGGAAUUUU |