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BaseInfo

ncRNA ID	novel_vvi_miR557
Species	Vitis vinifera
Class	miRNA
Genome position	Chr17:4716530-4716612 [+]
Reference genome	12X
Source	SRR1048204;SRR1528357;SRR1528358;SRR1528375;SRR1528377;SRR1528378;SRR1048206;SRR1048208;SRR1528384;SRR1528389;SRR1528391;SRR1049289;SRR1528393;SRR1528401;SRR1528407;SRR1528412;SRR2029783;SRR2029784
Length	21
Mature sequence(if miRNA)	63 - UCGAUAAACCUCUGCAUCCAG - 83
Stem-loop(if miRNA)	--        C    C       UC   C   AA     GUG   GGAUGCAG GGUU AUCGAUC  UUC UGA  UUGUU   A   |||||||| |||| |||||||  ||| |||  |||||   CCUACGUC CCAA UAGCUGG  AAG ACU  GACGA   A GA        U    A       CU   A   -A     AAA
Stem-loop sequence	GGAUGCAGCGGUUCAUCGAUCUCUUCCUGAAAUUGUUGUGAAAAAAGCAGAUCAAGAAUCGGUCGAUAAACCUCUGCAUCCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010666807.2	ncRNA:21   GACCUACGUCUCCAAAUAGCU   1   =|||||||||||||||||*|| targets:1374   UUGGAUGCAGAGGUUUAUGGA   1394 Target Full Sequence	1.5	PREDICTED: Vitis vinifera probable magnesium transporter NIPA4 (LOC100250391), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010666806.2	ncRNA:21   GACCUACGUCUCCAAAUAGCU   1   =|||||||||||||||||*|| targets:1404   UUGGAUGCAGAGGUUUAUGGA   1424 Target Full Sequence	1.5	PREDICTED: Vitis vinifera probable magnesium transporter NIPA4 (LOC100250391), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010666805.2	ncRNA:21   GACCUACGUCUCCAAAUAGCU   1   =|||||||||||||||||*|| targets:1421   UUGGAUGCAGAGGUUUAUGGA   1441 Target Full Sequence	1.5	PREDICTED: Vitis vinifera probable magnesium transporter NIPA4 (LOC100250391), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010666804.2	ncRNA:21   GACCUACGUCUCCAAAUAGCU   1   =|||||||||||||||||*|| targets:1461   UUGGAUGCAGAGGUUUAUGGA   1481 Target Full Sequence	1.5	PREDICTED: Vitis vinifera probable magnesium transporter NIPA4 (LOC100250391), transcript variant X2, mRNA	NA	coding protein	psRNATarget
KA153855.1	ncRNA:21   GACCUACGUCUCCAAAUAGCU   1   =|||||||||||||||||*|| targets:2233   UUGGAUGCAGAGGUUUAUGGA   2253 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_4812_Transcript_11/12_Confidence_0.436.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010663220.2	ncRNA:21   GACCUACGUCUCCA-AAUAGCU   1   ||||||||||||||-||||||| targets:3893   CUGGAUGCAGAGGUGUUAUCGA   3914 Target Full Sequence	3.0	PREDICTED: Vitis vinifera endoribonuclease Dicer homolog 1 (LOC100264308), mRNA	NA	coding protein	psRNATarget