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BaseInfo

ncRNA ID lus-miR396a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UUCCACAGCUUUCUUGAACUG - NA
Stem-loop(if miRNA) U   --     UU    UC            C         -AUG   AAAC    G
 GGC  UCUGC  GUGU  UUCCACAGCUUU UUGAACUGC    GCA    CAGA A
 |||  |||||  ||||  |||||||||||| |||||||||    |||    ||||
 CCG  AGACG  CAUA  AGGGUGUCGAAA AACUUGACG    CGU    GUCU U
A   AA     CC    GA            U         ACGA   ---A    C
Stem-loop sequence UGGCUCUGCUUGUGUUCUUCCACAGCUUUCUUGAACUGCAUGGCAAAACCAGAGAUCUCUGAUGCAGCAGCAGUUCAAUAAAGCUGUGGGAAGAUACCCGCAGAAAGCCA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).