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BaseInfo

ncRNA ID	novel_vvi_miR547
Species	Vitis vinifera
Class	miRNA
Genome position	Chr6:19741749-19741833 [-]
Reference genome	12X
Source	SRR1528356
Length	21
Mature sequence(if miRNA)	1 - GUAGAAACACUUCCUAGAAUC - 21
Stem-loop(if miRNA)	--                  AUC      A          AU   UUUUAGGAAGUGUUUCUA   UUUCUA UACUUGAAAA  A   ||||||||||||||||||   |||||| ||||||||||  A   AAGAUCCUUCACAAAGAU   AAAGAU AUGAACUUUU  A CU                  GGU      C          AA
Stem-loop sequence	UUUUAGGAAGUGUUUCUAAUCUUUCUAAUACUUGAAAAAUAAAAAUUUUCAAGUACUAGAAAUGGUAGAAACACUUCCUAGAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA165408.1	ncRNA:21   CUAAGAUCCUUCACAAAGAUG   1   ||||=||*||||||||||||| targets:3001   GAUUUUAAGAAGUGUUUCUAC   3021 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_14018_Transcript_1/3_Confidence_0.714.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA165409.1	ncRNA:21   CUAAGAUCCUUCACAAAGAUG   1   ||||=||*||||||||||||| targets:3090   GAUUUUAAGAAGUGUUUCUAC   3110 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_14018_Transcript_2/3_Confidence_0.714.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA166769.1	ncRNA:21   CUAAGAUCCUUCACAAAGAUG   1   ||*|||||||||||||||||* targets:4598   GAAUCUAGGAAGUGUUUCUAA   4618 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_5976_Transcript_9/10_Confidence_0.484.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA154839.1	ncRNA:21   CUAAGAUCCUUCACAAAGAUG   1   ||||=||*||||||||||||* targets:2784   GAUUUUAAGAAGUGUUUCUAA   2804 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_4953_Transcript_6/7_Confidence_0.478.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002270170.3	ncRNA:21   CUAAGAUCCUUCACAAAGAUG   1   ||||*|*|||||||||||||* targets:3940   GAUUAUCGGAAGUGUUUCUAA   3960 Target Full Sequence	3.0	PREDICTED: Vitis vinifera WD repeat-containing protein 44 (LOC100264924), mRNA	NA	coding protein	psRNATarget