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BaseInfo

ncRNA ID	novel_vvi_miR546
Species	Vitis vinifera
Class	miRNA
Genome position	Chr6:18570109-18570289 [+]
Reference genome	12X
Source	SRR1528356
Length	24
Mature sequence(if miRNA)	1 - AAAAAUUGUUGGUGUUCAUAUACU - 24
Stem-loop(if miRNA)	--                         G                                          UUAG      ACAUGAGGGGAU   AAAAAUUGUUGGUGUUCAUAUACUU UUAAUUGGGUGAAUUCUUGUUGCUCUAUUUGAUUGAUUCCUA    GUUCUU            A   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    ||||||   UUUUUAAUAACCACAAGUAUAUGAA AAUUAACCCACUUAAGAACAACGAGAUAAACUAACUAAGGAU    UUCAUA            A GA                         A                                          ---A      GGGUAGUUAUGA
Stem-loop sequence	AAAAAUUGUUGGUGUUCAUAUACUUGUUAAUUGGGUGAAUUCUUGUUGCUCUAUUUGAUUGAUUCCUAUUAGGUUCUUACAUGAGGGGAUAAAGUAUUGAUGGGAUACUUAUAGGAAUCAAUCAAAUAGAGCAACAAGAAUUCACCCAAUUAAAAAGUAUAUGAACACCAAUAAUUUUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA136967.1	ncRNA:24   UCAUAUACUUGUGGUUGUUAAAAA   1   =**||||*|||||||||||||||| targets:904   GAAAUAUCAACACCAACAAUUUUU   927 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_4364_Transcript_2/7_Confidence_0.455.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA136969.1	ncRNA:24   UCAUAUACUUGUGGUUGUUAAAAA   1   =**||||*|||||||||||||||| targets:904   GAAAUAUCAACACCAACAAUUUUU   927 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_4364_Transcript_7/7_Confidence_0.455.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA136968.1	ncRNA:24   UCAUAUACUUGUGGUUGUUAAAAA   1   =**||||*|||||||||||||||| targets:904   GAAAUAUCAACACCAACAAUUUUU   927 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_4364_Transcript_4/7_Confidence_0.455.Vivi mRNA sequence	NA	coding protein	psRNATarget