| ncRNA ID | novel_vvi_miR536 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr4:4042701-4042888 [+] |
| Reference genome | 12X |
| Source | SRR1528356;SRR1528371;SRR1528374 |
| Length | 24 |
| Mature sequence(if miRNA) | 165 - AAGGGUACGAAGAAUGUGAAGAAU - 188 |
| Stem-loop(if miRNA) |
-- C U G -------------------CC A UCUCCACUUCUUUGGACUUUUGAAAAUUUUUUGGAACAUCAUAUGGCUUGGAUGUU UC UCAC UUCUUCGUA CCU CA U G || |||| ||||||||| ||| || | AG AGUG AAGAAGCAU GGA CC U U UA A U G ACACUUAAAAACUCAUAAAAA - AAACUUAAAAAGGCCUUUAGUAAAGUGGUGGAGGAUUCACAUUGUUUGGAUAAAUU |
| Stem-loop sequence | UCCUCACUUUCUUCGUAGCCUCCCAAUUCUCCACUUCUUUGGACUUUUGAAAAUUUUUUGGAACAUCAUAUGGCUUGGAUGUUGUUUAAAUAGGUUUGUUACACUUAGGAGGUGGUGAAAUGAUUUCCGGAAAAAUUCAAAUCCAAAAAUACUCAAAAAUUCACAAGGGUACGAAGAAUGUGAAGAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| FQ395742.1 |
|
2.5 | Vitis vinifera clone SS0AFA14YF07 | NA | coding protein | psRNATarget |