ncRNA ID | novel_vvi_miR535 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:20015619-20015676 [+] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 22 |
Mature sequence(if miRNA) | 37 - AUCUCCGGCGAGCUCAUGGUGC - 58 |
Stem-loop(if miRNA) |
--   U  - UC      U   C   G A   ACC UG G  CGUCGG GAU GGA G G   ||| || |  |||||| ||| ||| | U   UGG AC C  GCGGCC CUA CUU C A CG   U  U GA      U   A   G A |
Stem-loop sequence | ACCUUGGUCCGUCGGUGAUCGGAGGAGUAACGUUCAAUCUCCGGCGAGCUCAUGGUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA160059.1 |
|
0.0 | TSA: Vitis vinifera Locus_11373_Transcript_4/5_Confidence_0.714.Vivi mRNA sequence | NA | coding protein | psRNATarget |