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BaseInfo

ncRNA ID lus-miR395d
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - CUGAAGUGUUUGGGGGAACUC - NA
Stem-loop(if miRNA)       --------A        U GAC       C   UG C  C    U     A   -AAU  UAAGU      -AC       U UG            GG U        A   AA  U
GGCCGA         GUCAGAUG C   UGGAGUU CCU  A CA UUCA UGAGA GCU    GC     GCUUUC   UGAAGUG U  GGGGAACUCUAG  G CAUUUGAC AAA  UU A
||||||         |||||||| |   ||||||| |||  | || |||| ||||| |||    ||     ||||||   ||||||| |  ||||||||||||  | |||||||| |||  || C
CCGGUU         CAGUUUAC G   AUCUCAA GGG  U GU AAGU ACUCU CGA    CG     UGAAAG   ACUUCAC A  UCCCUUGAGGUC  U GUAGACUG UUU  GG G
      GUAAAAAAA        C AAC       A   GU U  A    U     -   ACAU  -UAGU      GUU       C GU            AA U        A   CG  A
Stem-loop sequence GGCCGAAGUCAGAUGUCGACUGGAGUUCCCUUGACCACUUCAUUGAGAAGCUAAUGCUAAGUGCUUUCACUGAAGUGUUUGGGGGAACUCUAGGGGUCAUUUGACAAAAAAUUUACGAGGGCUUUAGUCAGAUGUUAACUGGAGUUCCCUUGACCACUUCAUUGGAAAGUUGAUGCUACAAGCUCUCAUUGAAAUGUUUGGGGAAACUCUACAAGCCAUUUGACAAAAAAAUGUUGGCC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).