ncRNA ID | lus-miR395d |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - CUGAAGUGUUUGGGGGAACUC - NA |
Stem-loop(if miRNA) |
      --------A        U GAC       C   UG C  C    U     A   -AAU  UAAGU      -AC       U UG            GG U        A   AA  U GGCCGA         GUCAGAUG C   UGGAGUU CCU  A CA UUCA UGAGA GCU    GC     GCUUUC   UGAAGUG U  GGGGAACUCUAG  G CAUUUGAC AAA  UU A ||||||         |||||||| |   ||||||| |||  | || |||| ||||| |||    ||     ||||||   ||||||| |  ||||||||||||  | |||||||| |||  || C CCGGUU         CAGUUUAC G   AUCUCAA GGG  U GU AAGU ACUCU CGA    CG     UGAAAG   ACUUCAC A  UCCCUUGAGGUC  U GUAGACUG UUU  GG G       GUAAAAAAA        C AAC       A   GU U  A    U     -   ACAU  -UAGU      GUU       C GU            AA U        A   CG  A |
Stem-loop sequence | GGCCGAAGUCAGAUGUCGACUGGAGUUCCCUUGACCACUUCAUUGAGAAGCUAAUGCUAAGUGCUUUCACUGAAGUGUUUGGGGGAACUCUAGGGGUCAUUUGACAAAAAAUUUACGAGGGCUUUAGUCAGAUGUUAACUGGAGUUCCCUUGACCACUUCAUUGGAAAGUUGAUGCUACAAGCUCUCAUUGAAAUGUUUGGGGAAACUCUACAAGCCAUUUGACAAAAAAAUGUUGGCC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |