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BaseInfo

ncRNA ID novel_vvi_miR533
Species Vitis vinifera
Class miRNA
Genome position Chr11:13433091-13433265 [-]
Reference genome 12X
Source SRR1528356
Length 24
Mature sequence(if miRNA) 1 - UUUUGUGGAAUUGUAGAGACGCCU - 24
Stem-loop(if miRNA) --CAC                            C      A -      C  C      C        GUAUAAAUU       UUUGA     G
     UUUCUACAAUUUCACAAAAUUAAAUUUA AUUAAA G GUUUUU UU AAGAGA ACUUUUUA         UAAUUUU     UAGGU A
     |||||||||||||||||||||||||||| |||||| | |||||| || |||||| ||||||||         |||||||     ||||| A
     AGAGAUGUUAAGGUGUUUUAAUUUAAAU UAAUUU C CAAAAA AA UUCUUU UGGAAGGU         GUUAAAA     AUCUA U
UCCGC                            A      A A      -  C      A        ---------       -----     A
Stem-loop sequence CACUUUCUACAAUUUCACAAAAUUAAAUUUACAUUAAAAGGUUUUUCUUCAAGAGACACUUUUUAGUAUAAAUUUAAUUUUUUUGAUAGGUGAAUAAUCUAAAAAUUGUGGAAGGUAUUUCUUCAAAAAAACACAUUUAAUAUAAAUUUAAUUUUGUGGAAUUGUAGAGACGCCU