ncRNA ID | novel_vvi_miR533 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr11:13433091-13433265 [-] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUGUGGAAUUGUAGAGACGCCU - 24 |
Stem-loop(if miRNA) |
--CAC                            C      A -      C  C      C        GUAUAAAUU       UUUGA     G      UUUCUACAAUUUCACAAAAUUAAAUUUA AUUAAA G GUUUUU UU AAGAGA ACUUUUUA         UAAUUUU     UAGGU A      |||||||||||||||||||||||||||| |||||| | |||||| || |||||| ||||||||         |||||||     ||||| A      AGAGAUGUUAAGGUGUUUUAAUUUAAAU UAAUUU C CAAAAA AA UUCUUU UGGAAGGU         GUUAAAA     AUCUA U UCCGC                            A      A A      -  C      A        ---------       -----     A |
Stem-loop sequence | CACUUUCUACAAUUUCACAAAAUUAAAUUUACAUUAAAAGGUUUUUCUUCAAGAGACACUUUUUAGUAUAAAUUUAAUUUUUUUGAUAGGUGAAUAAUCUAAAAAUUGUGGAAGGUAUUUCUUCAAAAAAACACAUUUAAUAUAAAUUUAAUUUUGUGGAAUUGUAGAGACGCCU |