ncRNA ID | novel_vvi_miR530 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr3:16781364-16781421 [-] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 21 |
Mature sequence(if miRNA) | 38 - AACAAAUAUCUGUAGAGGUUU - 58 |
Stem-loop(if miRNA) |
--A   A  A              GUUUU    ACA AU UCUGUAGAGGUUUU     G    ||| || ||||||||||||||     A    UGU UA AGACAUCUUUAAAG     A CUA   C  -              AGUGU |
Stem-loop sequence | AACAAAUAUCUGUAGAGGUUUUGUUUUGAAUGUGAGAAAUUUCUACAGAAUCUGUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA136418.1 |
|
3.0 | TSA: Vitis vinifera Locus_15657_Transcript_7/10_Confidence_0.233.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA136417.1 |
|
3.0 | TSA: Vitis vinifera Locus_15657_Transcript_9/10_Confidence_0.433.Vivi mRNA sequence | NA | coding protein | psRNATarget |