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BaseInfo

ncRNA ID	novel_vvi_miR528
Species	Vitis vinifera
Class	miRNA
Genome position	Chr3:13512257-13512443 [+]
Reference genome	12X
Source	SRR1528356;SRR1528357;SRR1528358;SRR1528364;SRR1528370;SRR1528371;SRR1528372;SRR1528374;SRR1528380;SRR1528391;SRR1528407
Length	24
Mature sequence(if miRNA)	164 - GAGGAUACGAAGAAUGUGAGGAUU - 187
Stem-loop(if miRNA)	--                 C   UU UA        GUAUU           AUUUUUCC   CAUCAUUUGAACACCCCUUAAGUGUAAUGAACUCA   UCCUCACAUUCUUCGUA CCU  C  AUUUUUAA     UUUGGAGUUUU        GGA                                   U   ||||||||||||||||| |||  |  ||||||||     |||||||||||        |||                                   U   AGGAGUGUAAGAAGCAU GGA  G  UAAGAAUU     AAACUUUAAAA        UUU                                   U UU                 A   GG --        -AAAU           -------A   UUUUAAACCCUCAAGUAUACUGAACCUAUAACAAA
Stem-loop sequence	UCCUCACAUUCUUCGUACCCUUUCUAAUUUUUAAGUAUUUUUGGAGUUUUAUUUUUCCGGACAUCAUUUGAACACCCCUUAAGUGUAAUGAACUCAUUUAAACAAUAUCCAAGUCAUAUGAACUCCCAAAUUUUUUUAAAAAUUUCAAAUAAAUUAAGAAUGGGAGGAUACGAAGAAUGUGAGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
FQ395742.1	ncRNA:24   UUAGGAGUGUAAGAAGCAUAGGAG   1   |*||||*||||||||||||||||= targets:1022   AUUCCUAACAUUCUUCGUAUCCUU   1045 Target Full Sequence	2.0	Vitis vinifera clone SS0AFA14YF07	NA	coding protein	psRNATarget