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BaseInfo

ncRNA ID novel_vvi_miR526
Species Vitis vinifera
Class miRNA
Genome position Chr3:1602305-1602438 [+]
Reference genome 12X
Source SRR1528356
Length 24
Mature sequence(if miRNA) 1 - AGGGAACUCGUCUCUUAAAGAGAC - 24
Stem-loop(if miRNA) ---A               -             C    UA    UUUUUUUUU     A        U
    GGGAACUCGUCUCUU AAAGAGACGAGUU CCAU  GGAA         UUUUA AUUUGGGA U
    ||||||||||||||| ||||||||||||| ||||  ||||         ||||| ||||||||
    CCCUUGAGCAGAGAA UUUCUCUGCUCAA GGUA  CCUU         AAAAU UAAAUUUU U
AUUA               C             U    CC    UUUUUAUAU     A        U
Stem-loop sequence AGGGAACUCGUCUCUUAAAGAGACGAGUUCCCAUUAGGAAUUUUUUUUUUUUUAAAUUUGGGAUUUUUUUUAAAUAUAAAAUAUAUUUUUUUCCCCAUGGUAACUCGUCUCUUUCAAGAGACGAGUUCCCAUUA