ncRNA ID | novel_vvi_miR525 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr3:12452975-12453162 [+] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 24 |
Mature sequence(if miRNA) | 165 - GAGGGUACGAAGAUUGUGAGGAUU - 188 |
Stem-loop(if miRNA) |
--        C               ------UA         -UA        UUUAU      UC   A     UUUA  ACCUCCUAAG   AACGAA   UCCUCACA UCUUCGUACCCUUAU        ACUUUUUUG   UUUUUGAA     AUUUUU  GGA AUCAU    GC          UGU      C   |||||||| |||||||||||||||        |||||||||   ||||||||     ||||||  ||| |||||    ||          |||      C   AGGAGUGU AGAAGCAUGGGAGUG        UGAAGAAAC   AAAAAUUU     UAAAAA  CCU UAGUA    CG          ACA      U UU        U               UUAAGAGG         CUC        ----U      -C   G     -UAC  --AACCUACA   AAUUUA |
Stem-loop sequence | UCCUCACACUCUUCGUACCCUUAUUAACUUUUUUGUAUUUUUGAAUUUAUAUUUUUUCGGAAAUCAUUUUAGCACCUCCUAAGUGUAACGAACCUAUUUAAACAACAUCCAAGCCAUAUGAUGUCCCAAAAAUUUUUAAAAACUCCAAAGAAGUGGAGAAUUGUGAGGGUACGAAGAUUGUGAGGAUU |