ncRNA ID | novel_vvi_miR519 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr2:16317304-16317450 [+] |
Reference genome | 12X |
Source | SRR1528356;SRR1528358;SRR1528371;SRR1528380;SRR1528381;SRR1528383;SRR1528386;SRR1528389;SRR1528391;SRR1528405;SRR1528408;SRR2029783 |
Length | 24 |
Mature sequence(if miRNA) | 124 - UGAGGAACUUUGGAAUUGUGGCAU - 147 |
Stem-loop(if miRNA) |
-- G           -    A UG   UGCAAAUU   G    UUUAU   G      UU G  AAU       UGGAA   G UAUAAUUUCAA GUUU U  AUA        UUU AAUA     UUG GAUAUU  C AA   UUUAAUG     A   | ||||||||||| |||| |  |||        ||| ||||     ||| ||||||  | ||   |||||||     A   C GUGUUAAGGUU CAAG A  UAU        AAA UUGU     AAU UUGUAA  G UU   AGAUUAU     U UA G           U    G GU   -------U   G    ----U   G      GG G  AUU       UUUAU |
Stem-loop sequence | GGUAUAAUUUCAAGUUUAUUGAUAUGCAAAUUUUUGAAUAUUUAUUUGGGAUAUUUUCGAAAAUUUUAAUGUGGAAAAUUAUUUUAUUAGAUUAUUGGGGAAUGUUGUAAUUGUUGAAAUUAUUGAGGAACUUUGGAAUUGUGGCAU |