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BaseInfo

ncRNA ID novel_vvi_miR519
Species Vitis vinifera
Class miRNA
Genome position Chr2:16317304-16317450 [+]
Reference genome 12X
Source SRR1528356;SRR1528358;SRR1528371;SRR1528380;SRR1528381;SRR1528383;SRR1528386;SRR1528389;SRR1528391;SRR1528405;SRR1528408;SRR2029783
Length 24
Mature sequence(if miRNA) 124 - UGAGGAACUUUGGAAUUGUGGCAU - 147
Stem-loop(if miRNA) -- G           -    A UG   UGCAAAUU   G    UUUAU   G      UU G  AAU       UGGAA
  G UAUAAUUUCAA GUUU U  AUA        UUU AAUA     UUG GAUAUU  C AA   UUUAAUG     A
  | ||||||||||| |||| |  |||        ||| ||||     ||| ||||||  | ||   |||||||     A
  C GUGUUAAGGUU CAAG A  UAU        AAA UUGU     AAU UUGUAA  G UU   AGAUUAU     U
UA G           U    G GU   -------U   G    ----U   G      GG G  AUU       UUUAU
Stem-loop sequence GGUAUAAUUUCAAGUUUAUUGAUAUGCAAAUUUUUGAAUAUUUAUUUGGGAUAUUUUCGAAAAUUUUAAUGUGGAAAAUUAUUUUAUUAGAUUAUUGGGGAAUGUUGUAAUUGUUGAAAUUAUUGAGGAACUUUGGAAUUGUGGCAU