| ncRNA ID | novel_vvi_miR516 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr19:4906841-4906969 [-] |
| Reference genome | 12X |
| Source | SRR1528356;SRR1528383 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - GUAGGCUCAAGCCUAGGCACCAGG - 24 |
| Stem-loop(if miRNA) |
- - --- UUCGAACUCAG UUGGUGCCUAGGCUUGAGCCUACGCGGCGCCCAGAGUGGUCUUCC CA GGA G ||||||||||||||||||||||||||||||||||||||||||||| || ||| GACCACGGAUCCGAACUCGGAUGCGCUGCGGGUCUCACCGGAAGG GU UGG U G A UCG AAUUCCGAACC |
| Stem-loop sequence | UUGGUGCCUAGGCUUGAGCCUACGCGGCGCCCAGAGUGGUCUUCCCAGGAUUCGAACUCAGGUCCAAGCCUUAAGGUGCUUGAGGAAGGCCACUCUGGGCGUCGCGUAGGCUCAAGCCUAGGCACCAGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_002270850.4 |
|
1.5 | PREDICTED: Vitis vinifera receptor-like cytosolic serine/threonine-protein kinase RBK2 (LOC100240843), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_010665583.1 |
|
2.5 | PREDICTED: Vitis vinifera protein STRICTOSIDINE SYNTHASE-LIKE 12-like (LOC100266318), mRNA | NA | coding protein | psRNATarget |