ncRNA ID | novel_vvi_miR512 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr19:12981885-12982069 [-] |
Reference genome | 12X |
Source | SRR1528356;SRR1528358;SRR1528364;SRR1528365;SRR1528371;SRR1528380;SRR1528383;SRR1528388;SRR1528391;SRR1528393;SRR1528397;SRR1528409 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUAGAAGGUGUCUCUUGAAGAGA - 24 |
Stem-loop(if miRNA) |
--                  AG     A     --UU      AA     G       --AU             C   A   UAUA   G        UUUUCAAGAGACACCUUU  UAUAA UCCAA    UUUUGG  UUGUA AAGGUGU    CUUGAAGAGACAC UUU AUA    UUG AAUUUA   ||||||||||||||||||  ||||| |||||    ||||||  ||||| |||||||    ||||||||||||| ||| |||    ||| |||||U   AGAAGUUCUCUGUGGAAG  AUGUU AGGUU    AAAAUU  AAUAU UUUUACA    GAAUUUCUCUGUG AAG UGU    GGU UUAAGG AG                  --     A     UUUU      -A     G       CAGU             A   G   -UAA   G      |
Stem-loop sequence | UUUUCAAGAGACACCUUUAGUAUAAAUCCAAUUUUUUGGAAUUGUAGAAGGUGUAUCUUGAAGAGACACCUUUAAUAUAUAUUGGAAUUUAUGGAAUUGUGGAAUUGUGGAAAGUGUCUCUUUAAGUGACACAUUUUGUAUAAAUUAAAAUUUUUUGGAAUUGUAGAAGGUGUCUCUUGAAGAGA |