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BaseInfo

ncRNA ID novel_vvi_miR512
Species Vitis vinifera
Class miRNA
Genome position Chr19:12981885-12982069 [-]
Reference genome 12X
Source SRR1528356;SRR1528358;SRR1528364;SRR1528365;SRR1528371;SRR1528380;SRR1528383;SRR1528388;SRR1528391;SRR1528393;SRR1528397;SRR1528409
Length 24
Mature sequence(if miRNA) 1 - UGUAGAAGGUGUCUCUUGAAGAGA - 24
Stem-loop(if miRNA) --                  AG     A     --UU      AA     G       --AU             C   A   UAUA   G     
  UUUUCAAGAGACACCUUU  UAUAA UCCAA    UUUUGG  UUGUA AAGGUGU    CUUGAAGAGACAC UUU AUA    UUG AAUUUA
  ||||||||||||||||||  ||||| |||||    ||||||  ||||| |||||||    ||||||||||||| ||| |||    ||| |||||U
  AGAAGUUCUCUGUGGAAG  AUGUU AGGUU    AAAAUU  AAUAU UUUUACA    GAAUUUCUCUGUG AAG UGU    GGU UUAAGG
AG                  --     A     UUUU      -A     G       CAGU             A   G   -UAA   G     
Stem-loop sequence UUUUCAAGAGACACCUUUAGUAUAAAUCCAAUUUUUUGGAAUUGUAGAAGGUGUAUCUUGAAGAGACACCUUUAAUAUAUAUUGGAAUUUAUGGAAUUGUGGAAUUGUGGAAAGUGUCUCUUUAAGUGACACAUUUUGUAUAAAUUAAAAUUUUUUGGAAUUGUAGAAGGUGUCUCUUGAAGAGA