ncRNA ID | novel_vvi_miR511 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr19:19961229-19961312 [-] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 21 |
Mature sequence(if miRNA) | 64 - UCUGAAAAGUGUUUCUAGUCU - 84 |
Stem-loop(if miRNA) |
--UC   A                  A             UU     UGA AAGUGUUUCUAGUCUUUU UAAUACUUGAAAA  U     ||| |||||||||||||||||| |||||||||||||  U     ACU UUCAUAAAGAUCAGAAAG AUUAUGAACUUUU  U UAAU   C                  -             UA |
Stem-loop sequence | UCUGAAAAGUGUUUCUAGUCUUUUAUAAUACUUGAAAAUUUUUAUUUUUCAAGUAUUAGAAAGACUAGAAAUACUUCUCAUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA152277.1 |
|
1.5 | TSA: Vitis vinifera Locus_5026_Transcript_4/5_Confidence_0.538.Vivi mRNA sequence | NA | coding protein | psRNATarget |