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BaseInfo

ncRNA ID novel_vvi_miR508
Species Vitis vinifera
Class miRNA
Genome position Chr19:259822-260015 [+]
Reference genome 12X
Source SRR1528356;SRR1528375;SRR1528380;SRR1528383
Length 24
Mature sequence(if miRNA) 171 - UGAAGACUGUGAACUUAACUACCU - 194
Stem-loop(if miRNA) --A            G UUUU    AA    ---- G            CCU       ------      UAAAAC       CAA            -      G
   UAGUUAAGUUCA G    GUCU  AGAU    U UGGACUUAACUA   UCAAGUU      UGUACA      AACUUGA   UAGUUAAGUUCA GGUUUU U
   |||||||||||| |    ||||  ||||    | ||||||||||||   |||||||      ||||||      |||||||   |||||||||||| |||||| U
   AUCAAUUCAAGU U    CAGA  UCUG    G ACUUGAAUUGAU   AGUUCAA      ACAUGU      UUGAACU   AUCAAUUCAAGU UCAGAA U
UCC            G ----    AG    UUUU G            AAC       CAAAAU      ------       UCC            G      A
Stem-loop sequence AUAGUUAAGUUCAGGUUUUGUCUAAAGAUUGUGGACUUAACUACCUUCAAGUUUGUACAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUUUAAAGACUGUGAACUUAACUACCUUCAAGUUUGUACAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUCUGAAGACUGUGAACUUAACUACCU