ncRNA ID | novel_vvi_miR508 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr19:259822-260015 [+] |
Reference genome | 12X |
Source | SRR1528356;SRR1528375;SRR1528380;SRR1528383 |
Length | 24 |
Mature sequence(if miRNA) | 171 - UGAAGACUGUGAACUUAACUACCU - 194 |
Stem-loop(if miRNA) |
--A            G UUUU    AA    ---- G            CCU       ------      UAAAAC       CAA            -      G    UAGUUAAGUUCA G    GUCU  AGAU    U UGGACUUAACUA   UCAAGUU      UGUACA      AACUUGA   UAGUUAAGUUCA GGUUUU U    |||||||||||| |    ||||  ||||    | ||||||||||||   |||||||      ||||||      |||||||   |||||||||||| |||||| U    AUCAAUUCAAGU U    CAGA  UCUG    G ACUUGAAUUGAU   AGUUCAA      ACAUGU      UUGAACU   AUCAAUUCAAGU UCAGAA U UCC            G ----    AG    UUUU G            AAC       CAAAAU      ------       UCC            G      A |
Stem-loop sequence | AUAGUUAAGUUCAGGUUUUGUCUAAAGAUUGUGGACUUAACUACCUUCAAGUUUGUACAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUUUAAAGACUGUGAACUUAACUACCUUCAAGUUUGUACAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUCUGAAGACUGUGAACUUAACUACCU |