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BaseInfo

ncRNA ID novel_vvi_miR507
Species Vitis vinifera
Class miRNA
Genome position Chr19:24008905-24009092 [-]
Reference genome 12X
Source SRR1528356
Length 24
Mature sequence(if miRNA) 1 - GGGGAUACGAAGAAUGUAAGAAUU - 24
Stem-loop(if miRNA) --    C            C        A      AGUA      GA    ----   U   UC    A    U   ACAACUACUAA      UGA
  UUCU ACAUUUUUCGUA CCUUUCUA UUUUUA    UUUUUG  GUUU    AAU UUU  GGAC UCAU UGA           GUGUAA   A
  |||| |||||||||||| |||||||| ||||||    ||||||  ||||    ||| |||  |||| |||| |||           ||||||   C
  AAGA UGUAAGAAGCAU GGGGAGGU AGAGGU    AGAAAC  CAAA    UUA AAA  UCUG AGUA ACU           CAUAUU   U
UU    A            A        A      --GA      UA    AUUU   C   UC    A    U   -GAAUCUAUAA      UAU
Stem-loop sequence UUCUCACAUUUUUCGUACCCUUUCUAAUUUUUAAGUAUUUUUGGAGUUUAAUUUUUUCGGACAUCAUUUGAACAACUACUAAGUGUAAUGAACUUAUUUAUACAAUAUCUAAGUCAUAUGAAGUCUCUAAACAUUUUUAAAACAUCAAAGAAGUGGAGAAUGGAGGGGAUACGAAGAAUGUAAGAAUU