ncRNA ID | novel_vvi_miR497 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:19120628-19120683 [+] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 24 |
Mature sequence(if miRNA) | 33 - UGGACUGUGAGAGGUGUGUGAUGC - 56 |
Stem-loop(if miRNA) |
---A             A  AA     A     UAUACAUCUUUCA GG  CAGUG C     ||||||||||||| ||  ||||| C     GUGUGUGGAGAGU UC  GUUAC U CGUA             G  AG     A |
Stem-loop sequence | AUAUACAUCUUUCAAGGAACAGUGACCUACAUUGGACUGUGAGAGGUGUGUGAUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658960.2 |
|
2.0 | PREDICTED: Vitis vinifera protein EPIDERMAL PATTERNING FACTOR 1 (LOC104880875), mRNA | NA | coding protein | psRNATarget |