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BaseInfo

ncRNA ID lus-miR394a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 20
Mature sequence(if miRNA) NA - UUGGCAUUCUGUCCACCUCC - NA
Stem-loop(if miRNA)       GU     GGUUU  U         -A      U C          -  C    -AC    GUACGUACUGAAAUC
GGGUUU  CAAAG     CU ACAGAGUUU  UUGGCA U UGUCCACCUC CC UACU   GUAC               U
||||||  |||||     || |||||||||  |||||| | |||||||||| || ||||   ||||
UCCAAA  GUUUC     GG UGUCUCAAG  AACCGU A ACGGGUGGAG GG GUGG   GGAG               A
      AU     ACUCU  U         AC      C U          U  A    ACC    GAAUCAACUCUAACU
Stem-loop sequence GGGUUUGUCAAAGGGUUUCUUACAGAGUUUAUUGGCAUUCUGUCCACCUCCCCUACUACGUACGUACGUACUGAAAUCUAUCAAUCUCAACUAAGGAGGCCAGGUGAGGUGAGGUGGGCAUACUGCCAACAGAACUCUGUUGGUCUCACUUUGUAAAACCU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).