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BaseInfo

ncRNA ID novel_vvi_miR476
Species Vitis vinifera
Class miRNA
Genome position Chr1:1342039-1342115 [-]
Reference genome 12X
Source SRR1528356
Length 23
Mature sequence(if miRNA) 55 - UUUGUCACAUGUAAUUUUUACUG - 77
Stem-loop(if miRNA) --                   ACU   AUUUUAUCAAGU
  UUUGUCACAUGUAAUUUUU   GAG            U
  |||||||||||||||||||   |||            U
  AAACAGUGUACAUUAAAAA   CAC            C
GA                   --A   UUUAUGUGCUCU
Stem-loop sequence UUUGUCACAUGUAAUUUUUACUGAGAUUUUAUCAAGUUUCUCUCGUGUAUUUCACAAAAAAUUACAUGUGACAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA135312.1
ncRNA:23   GUCAUUUUUAAUGUACACUGUUU   1
  |||||||||||||||||||||||
targets:486   CAGUAAAAAUUACAUGUGACAAA   508

0.0 TSA: Vitis vinifera Locus_17872_Transcript_2/8_Confidence_0.292.Vivi mRNA sequence NA coding protein psRNATarget