| ncRNA ID | novel_vvi_miR472 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr14:11386762-11386987 [-] |
| Reference genome | 12X |
| Source | SRR1048204;SRR1048207;SRR1048201;SRR1049289;SRR1049290;SRR1048203;SRR1049294;SRR1049296 |
| Length | 24 |
| Mature sequence(if miRNA) | 203 - AGAAUCAAAGGAUAGUGUAGAGAC - 226 |
| Stem-loop(if miRNA) |
-- U CUCAU CA UUCAUA AAAAUUUU C UUC - UU ------AAAU UA AGAAUCAAAGGA AGUGUAGAGACUACA AAUCCUA UG AAGAAAAA UGC AAAAUUUUC UUUUAG AGAAAUU UGCAUAU UUC G |||||||||||| ||||||||||||||| ||||||| || |||||||| ||| ||||||||| |||||| ||||||| ||||||| ||| UUUUAGUUUCCU UCGUAUCUCUGAUGU UUAGGAU AC UUCUUUUU ACG UUUUAAAAG AAAAUU UCUUUAA ACGUGUG AAG C CU U AAAUU -- ------ AAAACAAU U -UA A -- GAAUACCCUU UA |
| Stem-loop sequence | AGAAUCAAAGGAUAGUGUAGAGACUACACUCAUAAUCCUACAUGUUCAUAAAGAAAAAAAAAUUUUUGCCAAAAUUUUCUUCUUUUAGAGAAAUUUUUGCAUAUAAAUUUCUAGCAUGAAUUCCCAUAAGGUGUGCAAAUUUCUAUUAAAAAUGAAAAUUUUUGCAUAACAAAAUUUUUCUUCAUAGGAUUUUAAAUGUAGUCUCUAUGCUUUCCUUUGAUUUUUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_019219413.1 |
|
2.5 | PREDICTED: Vitis vinifera uncharacterized LOC100852560 (LOC100852560), transcript variant X3, mRNA | NA | coding protein | psRNATarget |