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BaseInfo

ncRNA ID	novel_vvi_miR470
Species	Vitis vinifera
Class	miRNA
Genome position	Chr15:4030665-4030765 [-]
Reference genome	12X
Source	SRR1528356
Length	23
Mature sequence(if miRNA)	1 - UGGCUGAGUAUGAAUUUAUGACA - 23
Stem-loop(if miRNA)	--     -U    A  U UG  G   UAAUAUUA  UU     -   U UUA   UCAUA  UUUA AC U  GU AAU        AA  UGGGC CAU U   U   |||||  |||| || |  || |||        ||  ||||| ||| |   AGUAU  AAGU UG A  CG UUG        UU  AUCCG GUA G   U AC     UU    A  - GU  G   UUCUAACG  UU     A   C UUU
Stem-loop sequence	UCAUAUUUUAAACUUUGGUGAAUUAAUAUUAAAUUUGGGCCAUUUUUAUUUUUGCAUGAGCCUAUUUUGCAAUCUUGUUGGCUGAGUAUGAAUUUAUGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA154200.1	ncRNA:23   ACAGUAUUUAAGUAUGAGUCGGU   1   ||||||*=||||||||||||||| targets:1640   UGUCAUCGAUUCAUACUCAGCCA   1662 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_3165_Transcript_15/17_Confidence_0.238.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA154199.1	ncRNA:23   ACAGUAUUUAAGUAUGAGUCGGU   1   ||||||*=||||||||||||||| targets:1980   UGUCAUCGAUUCAUACUCAGCCA   2002 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_3165_Transcript_10/17_Confidence_0.246.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA148808.1	ncRNA:23   ACAGUAUUUAAGUAUGAGUCGGU   1   ||||||*|||||=|||||||||| targets:54   UGUCAUCAAUUCGUACUCAGCCA   76 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_34582_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA166897.1	ncRNA:23   ACAGUAUUUAAGUAUGAGUCGGU   1   ||||||*|||||=|||||||||| targets:1349   UGUCAUCAAUUCGUACUCAGCCA   1371 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_20471_Transcript_1/3_Confidence_0.667.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA134579.1	ncRNA:23   ACAGUAUUUAAGUAUGAGUCGGU   1   |||=||*|||||=|||||||||| targets:16   UGUUAUCAAUUCGUACUCAGCCA   38 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_24902_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget