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BaseInfo

ncRNA ID novel_vvi_miR469
Species Vitis vinifera
Class miRNA
Genome position Chr15:4535285-4535342 [-]
Reference genome 12X
Source SRR1528356;SRR1528389
Length 24
Mature sequence(if miRNA) 1 - AGUCAAAGCCGUAGUCACCAACUG - 24
Stem-loop(if miRNA) --                     CA   U
  GUUGGUGACUACGGCUUUGAC  UUU A
  |||||||||||||||||||||  |||
  CAACCACUGAUGCCGAAACUG  AAA A
GU                     AA   A
Stem-loop sequence GUUGGUGACUACGGCUUUGACCAUUUUAAAAAAAAGUCAAAGCCGUAGUCACCAACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   GUCAACCACUGAUGCCGAAACUGA   1
  =|||||||||||||||||||||=|
targets:1   UAGUUGGUGACUACGGCUUUGAUU   24

1.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget