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BaseInfo

ncRNA ID novel_vvi_miR466
Species Vitis vinifera
Class miRNA
Genome position Chr1:8324634-8324682 [-]
Reference genome 12X
Source SRR1528356
Length 21
Mature sequence(if miRNA) 29 - UUCAAAGGGCUAUUUUGAACA - 49
Stem-loop(if miRNA) ---UU   A     -        CA
     CAA GGGCU AUUUUGAA  A
     ||| ||||| ||||||||  U
     GUU CCCGA UAAAACUU  A
CGACU   G     C        UG
Stem-loop sequence UUCAAAGGGCUAUUUUGAACAAUAGUUUCAAAAUCAGCCCGUUGUCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002281748.4
ncRNA:21   ACAAGUUUUAUCGGGAAACUU   1
  ||*||||||||||*|||||||
targets:629   UGAUCAAAAUAGCACUUUGAA   649

2.5 PREDICTED: Vitis vinifera uncharacterized protein YKR070W (LOC100241719), mRNA NA coding protein psRNATarget