Search result

BaseInfo

ncRNA ID lus-miR393c
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCCAAAGGGAUCGCAUUGAUC - NA
Stem-loop(if miRNA)     A    A     ---UUGGUU   --U  A           C            C    U     C  -  ACCUACC  CC
AAGA UUGA AGAAG         UCC   GC ACUAGAGGAGG AUCCAAAGGGAU GCAU GAUCC AG CU       UG  U
|||| |||| |||||         |||   || ||||||||||| |||||||||||| |||| ||||| || ||       ||
UUCU AACU UCUUU         GGG   CG UGGUUUCCUCU UAGGUUUCCCUA CGUA CUAGG UC GA       AC  A
    C    C     UUGUGUGUU   UUU  A           U            U    -     U  U  CACUUAA  CA
Stem-loop sequence AAGAAUUGAAAGAAGUUGGUUUCCUGCAACUAGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAGCUACCUACCUGCCUAACCAAAUUCACAGUCUUGGAUCAUGCUAUCCCUUUGGAUUUCUCCUUUGGUAGCUUUGGGUUGUGUGUUUUUCUCUCAACUCUU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).