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BaseInfo

ncRNA ID novel_vvi_miR461
Species Vitis vinifera
Class miRNA
Genome position Chr14:7652060-7652253 [-]
Reference genome 12X
Source SRR1528356
Length 24
Mature sequence(if miRNA) 1 - UGAAGACUGUAGACUUAACUACCU - 24
Stem-loop(if miRNA) --A          CAG  UUU    AA    ---- G            CCU       ------      UAAAAC       CAA          -CA      G
   UAGUUAAGUU   GC   GUCU  AGAC    U UGGACUUAACUA   UCAAGUU      UGUAUA      AACUUGA   UAGUUAAGUU   GGUUUU U
   ||||||||||   ||   ||||  ||||    | ||||||||||||   |||||||      ||||||      |||||||   ||||||||||   |||||| U
   AUCAAUUCAG   UG   CAGA  UCUG    G ACUUGAAUUGAU   AGUUCAA      ACAUGU      UUGAACU   AUCAAUUCAG   UCAGAA U
UCC          --A  --U    AG    UUUU G            AAC       CAAAAU      ------       UCC          AUA      A
Stem-loop sequence AUAGUUAAGUUCAGGCUUUGUCUAAAGACUGUGGACUUAACUACCUUCAAGUUUGUAUAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUUUAAAGACUAUAGACUUAACUACCUUCAAGUUUGUACAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUCUGAAGACUGUAGACUUAACUACCU