ncRNA ID | novel_vvi_miR461 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:7652060-7652253 [-] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGAAGACUGUAGACUUAACUACCU - 24 |
Stem-loop(if miRNA) |
--A          CAG  UUU    AA    ---- G            CCU       ------      UAAAAC       CAA          -CA      G    UAGUUAAGUU   GC   GUCU  AGAC    U UGGACUUAACUA   UCAAGUU      UGUAUA      AACUUGA   UAGUUAAGUU   GGUUUU U    ||||||||||   ||   ||||  ||||    | ||||||||||||   |||||||      ||||||      |||||||   ||||||||||   |||||| U    AUCAAUUCAG   UG   CAGA  UCUG    G ACUUGAAUUGAU   AGUUCAA      ACAUGU      UUGAACU   AUCAAUUCAG   UCAGAA U UCC          --A  --U    AG    UUUU G            AAC       CAAAAU      ------       UCC          AUA      A |
Stem-loop sequence | AUAGUUAAGUUCAGGCUUUGUCUAAAGACUGUGGACUUAACUACCUUCAAGUUUGUAUAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUUUAAAGACUAUAGACUUAACUACCUUCAAGUUUGUACAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUCUGAAGACUGUAGACUUAACUACCU |