Search result

BaseInfo

ncRNA ID novel_vvi_miR458
Species Vitis vinifera
Class miRNA
Genome position Chr14:3689863-3689948 [+]
Reference genome 12X
Source SRR1528356;SRR1528391
Length 24
Mature sequence(if miRNA) 1 - AAGGGUACGAAGAAUGUGAAGAAU - 24
Stem-loop(if miRNA) --A      C           A        CA      A   G
   AGGGUA GAAGAAUGUGA GAAUGAUA  AGGAAU UGA G
   |||||| ||||||||||| ||||||||  |||||| |||
   UUCCAU CUUUUUACACU CUUACUAU  UUCUUA GCU U
AUC      A           C        AC      C   C
Stem-loop sequence AAGGGUACGAAGAAUGUGAAGAAUGAUACAAGGAAUAUGAGGUCUCGCAUUCUUCAUAUCAUUCCUCACAUUUUUCAUACCUUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
FQ395742.1
ncRNA:24   UAAGAAGUGUAAGAAGCAUGGGAA   1
  ||||*|*||||||||||||=||||
targets:1022   AUUCCUAACAUUCUUCGUAUCCUU   1045

2.5 Vitis vinifera clone SS0AFA14YF07 NA coding protein psRNATarget