ncRNA ID | novel_vvi_miR458 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:3689863-3689948 [+] |
Reference genome | 12X |
Source | SRR1528356;SRR1528391 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGGUACGAAGAAUGUGAAGAAU - 24 |
Stem-loop(if miRNA) |
--A      C           A        CA      A   G    AGGGUA GAAGAAUGUGA GAAUGAUA  AGGAAU UGA G    |||||| ||||||||||| ||||||||  |||||| |||    UUCCAU CUUUUUACACU CUUACUAU  UUCUUA GCU U AUC      A           C        AC      C   C |
Stem-loop sequence | AAGGGUACGAAGAAUGUGAAGAAUGAUACAAGGAAUAUGAGGUCUCGCAUUCUUCAUAUCAUUCCUCACAUUUUUCAUACCUUCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FQ395742.1 |
|
2.5 | Vitis vinifera clone SS0AFA14YF07 | NA | coding protein | psRNATarget |