ncRNA ID | novel_vvi_miR456 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:22776883-22776941 [+] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACCAAUAUGACUAAAGAGAACUU - 24 |
Stem-loop(if miRNA) |
--           C    GA        U   AACCAAUAUGA UAAA  GAACUUGU A   ||||||||||| ||||  |||||||| U   UUGGUUGUAUU AUUU  UUUGAAUA C AG           A    AA        A |
Stem-loop sequence | AACCAAUAUGACUAAAGAGAACUUGUUAUCAAUAAGUUUAAUUUAAUUAUGUUGGUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002285519.4 |
|
2.5 | PREDICTED: Vitis vinifera uncharacterized LOC100263843 (LOC100263843), mRNA | NA | coding protein | psRNATarget | |||||||||
KA164834.1 |
|
2.5 | TSA: Vitis vinifera Locus_19927_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |