Search result

BaseInfo

ncRNA ID novel_vvi_miR456
Species Vitis vinifera
Class miRNA
Genome position Chr14:22776883-22776941 [+]
Reference genome 12X
Source SRR1528356
Length 24
Mature sequence(if miRNA) 1 - AACCAAUAUGACUAAAGAGAACUU - 24
Stem-loop(if miRNA) --           C    GA        U
  AACCAAUAUGA UAAA  GAACUUGU A
  ||||||||||| ||||  |||||||| U
  UUGGUUGUAUU AUUU  UUUGAAUA C
AG           A    AA        A
Stem-loop sequence AACCAAUAUGACUAAAGAGAACUUGUUAUCAAUAAGUUUAAUUUAAUUAUGUUGGUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002285519.4
ncRNA:24   UUCAAGAGAAAUCAGUAUAACCAA   1
  **||||*||||||||||||*||||
targets:1834   UUGUUCCCUUUAGUCAUAUGGGUU   1857

2.5 PREDICTED: Vitis vinifera uncharacterized LOC100263843 (LOC100263843), mRNA NA coding protein psRNATarget
KA164834.1
ncRNA:24   UUCAAGAGAAAUCAGUAUAACCAA   1
  **||||*||||||||||||*||||
targets:1931   UUGUUCCCUUUAGUCAUAUGGGUU   1954

2.5 TSA: Vitis vinifera Locus_19927_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget