ncRNA ID | novel_vvi_miR455 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr1:4727294-4727352 [-] |
Reference genome | 12X |
Source | SRR1048204;SRR1528370;SRR1528371;SRR1528381;SRR1528406;SRR1049295 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUUAGUUUAAUGAUGUUGGUUGA - 24 |
Stem-loop(if miRNA) |
--         A      G         U   AACCAACAU AUUAAA UGAACUUAU A   ||||||||| |||||| ||||||||| U   UUGGUUGUA UAAUUU AUUUGAAUA C AG         G      G         A |
Stem-loop sequence | AACCAACAUAAUUAAAGUGAACUUAUUAUCAAUAAGUUUAGUUUAAUGAUGUUGGUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA138950.1 |
|
2.5 | TSA: Vitis vinifera Locus_4335_Transcript_8/10_Confidence_0.412.Vivi mRNA sequence | NA | coding protein | psRNATarget |