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BaseInfo

ncRNA ID lus-miR393b
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCCAAAGGGAUCGCAUUGAUC - NA
Stem-loop(if miRNA) U    AACUAAC    -U     --UU        C             U        CA    GAUAUAGAG   AUCU
 GAUG       UUAG  GCAGA    GAGAGUUC AAAGGGAUCGCAU GAUCUAAU  UGAU         AGC    U
 ||||       ||||  |||||    |||||||| ||||||||||||| ||||||||  ||||         |||    C
 CUAC       AAUC  CGUCU    CUCUUAAG UUUCCCUAGCGUA CUAGAUUG  AUUA         UCG    C
A    -ACCUCA    UU     CUAC        C             -        --    --------A   ACCA
Stem-loop sequence UGAUGAACUAACUUAGUGCAGAUUGAGAGUUCCAAAGGGAUCGCAUUGAUCUAAUCAUGAUGAUAUAGAGAGCAUCUUCCACCAGCUAAUUAGUUAGAUCAUGCGAUCCCUUUCGAAUUCUCCAUCUCUGCUUCUAAACUCCACAUCA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).