ncRNA ID | lus-miR393b |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UCCAAAGGGAUCGCAUUGAUC - NA |
Stem-loop(if miRNA) |
U    AACUAAC    -U     --UU        C             U        CA    GAUAUAGAG   AUCU  GAUG       UUAG  GCAGA    GAGAGUUC AAAGGGAUCGCAU GAUCUAAU  UGAU         AGC    U  ||||       ||||  |||||    |||||||| ||||||||||||| ||||||||  ||||         |||    C  CUAC       AAUC  CGUCU    CUCUUAAG UUUCCCUAGCGUA CUAGAUUG  AUUA         UCG    C A    -ACCUCA    UU     CUAC        C             -        --    --------A   ACCA |
Stem-loop sequence | UGAUGAACUAACUUAGUGCAGAUUGAGAGUUCCAAAGGGAUCGCAUUGAUCUAAUCAUGAUGAUAUAGAGAGCAUCUUCCACCAGCUAAUUAGUUAGAUCAUGCGAUCCCUUUCGAAUUCUCCAUCUCUGCUUCUAAACUCCACAUCA |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |