ncRNA ID | novel_vvi_miR450 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:665552-665610 [-] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 24 |
Mature sequence(if miRNA) | 36 - AACCAACAUAACUAAAGUGAACUU - 59 |
Stem-loop(if miRNA) |
--   C       C    G         U   AAC AACAUAA UAAA UGAACUUAU A   ||| ||||||| |||| ||||||||| U   UUG UUGUAUU AUUU AUUUGAAUA C AG   A       A    A         A |
Stem-loop sequence | AACCAACAUAACUAAAGUGAACUUAUUAUCAAUAAGUUUAAUUUAAUUAUGUUAGUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA172889.1 |
|
1.5 | TSA: Vitis vinifera Locus_787_Transcript_4/6_Confidence_0.529.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA139149.1 |
|
1.5 | TSA: Vitis vinifera Locus_1202_Transcript_8/9_Confidence_0.400.Vivi mRNA sequence | NA | coding protein | psRNATarget |