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BaseInfo

ncRNA ID lus-miR393a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCCAAAGGGAUCGCAUUGAUC - NA
Stem-loop(if miRNA)     AUG    AG    AAGGUUU - --U  A           C            C    U     C  -   CCCACCUACC
AAGA   GAGA  AAAG       C C   GC ACUAGAGGAGG AUCCAAAGGGAU GCAU GAUCC AG CUA          U
||||   ||||  ||||       | |   || ||||||||||| |||||||||||| |||| ||||| || |||
UUCU   CUCU  UUUC       G G   CG UGGUUUCCUCU UAGGUUUCCCUA CGUG CUAGG UC GAU          A
    CAA    CU    GUGUGUU U UUU  A           U            U    -     U  U   ACUUAAACCA
Stem-loop sequence AAGAAUGGAGAAGAAAGAAGGUUUCCUGCAACUAGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAGCUACCCACCUACCUAACCAAAUUCAUAGUCUUGGAUCGUGCUAUCCCUUUGGAUUUCUCCUUUGGUAGCUUUGUGUUGUGUGCUUUUCUCUCAACUCUU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).