ncRNA ID | lus-miR393a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UCCAAAGGGAUCGCAUUGAUC - NA |
Stem-loop(if miRNA) |
    AUG    AG    AAGGUUU - --U  A           C            C    U     C  -   CCCACCUACC AAGA   GAGA  AAAG       C C   GC ACUAGAGGAGG AUCCAAAGGGAU GCAU GAUCC AG CUA          U ||||   ||||  ||||       | |   || ||||||||||| |||||||||||| |||| ||||| || ||| UUCU   CUCU  UUUC       G G   CG UGGUUUCCUCU UAGGUUUCCCUA CGUG CUAGG UC GAU          A     CAA    CU    GUGUGUU U UUU  A           U            U    -     U  U   ACUUAAACCA |
Stem-loop sequence | AAGAAUGGAGAAGAAAGAAGGUUUCCUGCAACUAGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAGCUACCCACCUACCUAACCAAAUUCAUAGUCUUGGAUCGUGCUAUCCCUUUGGAUUUCUCCUUUGGUAGCUUUGUGUUGUGUGCUUUUCUCUCAACUCUU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |