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BaseInfo

ncRNA ID novel_vvi_miR440
Species Vitis vinifera
Class miRNA
Genome position Chr13:23446870-23447006 [+]
Reference genome 12X
Source SRR1528356;SRR1528370;SRR1528371;SRR1528374;SRR1528381;SRR1528391
Length 24
Mature sequence(if miRNA) 1 - AUGGGAACUCGUAUCUUGAAGAGA - 24
Stem-loop(if miRNA) --AU          A                   -CU       UU UU      A      UU    U
    GGGAACUCGU UCUUGAAGAGACGAGUUCC   UGAGGAA  G  UUUUUU UUUUUA  UUUU A
    |||||||||| |||||||||||||||||||   |||||||  |  |||||| ||||||  |||| U
    UCCUUGAGCA AGAACUUCUCUGCUCAAGG   AUUUUUU  U  AAAAAA AAAAAU  AGGG U
GAAU          G                   UAC       UU UU      -      UU    U
Stem-loop sequence AUGGGAACUCGUAUCUUGAAGAGACGAGUUCCCUUGAGGAAUUGUUUUUUUUAUUUUUAUUUUUUUAUUUGGGAUUUAAAAAAAAAAAUUUUUUUUUUUACAUGGAACUCGUCUCUUCAAGAGACGAGUUCCUUAAG