ncRNA ID | novel_vvi_miR440 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:23446870-23447006 [+] |
Reference genome | 12X |
Source | SRR1528356;SRR1528370;SRR1528371;SRR1528374;SRR1528381;SRR1528391 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGGAACUCGUAUCUUGAAGAGA - 24 |
Stem-loop(if miRNA) |
--AU          A                   -CU       UU UU      A      UU    U     GGGAACUCGU UCUUGAAGAGACGAGUUCC   UGAGGAA  G  UUUUUU UUUUUA  UUUU A     |||||||||| |||||||||||||||||||   |||||||  |  |||||| ||||||  |||| U     UCCUUGAGCA AGAACUUCUCUGCUCAAGG   AUUUUUU  U  AAAAAA AAAAAU  AGGG U GAAU          G                   UAC       UU UU      -      UU    U |
Stem-loop sequence | AUGGGAACUCGUAUCUUGAAGAGACGAGUUCCCUUGAGGAAUUGUUUUUUUUAUUUUUAUUUUUUUAUUUGGGAUUUAAAAAAAAAAAUUUUUUUUUUUACAUGGAACUCGUCUCUUCAAGAGACGAGUUCCUUAAG |