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BaseInfo

ncRNA ID	novel_vvi_miR439
Species	Vitis vinifera
Class	miRNA
Genome position	Chr13:22133418-22133604 [+]
Reference genome	12X
Source	SRR1528356
Length	24
Mature sequence(if miRNA)	164 - GAAGGUACGAAGAAUGUGAGGAUU - 187
Stem-loop(if miRNA)	--                  U   G A        UGUAU          ----GCU     CC   A     UUCAC ACUUCCUAAGUGUAACGA   UCCUCACAUUCUUCGUAC CUU U AAUUUUUU     UUUUGGAUUU       UUUUU  GGA AUCAU     C                  A   |||||||||||||||||| ||| | ||||||||     ||||||||||       |||||  ||| |||||     |                  C   AGGAGUGUAAGAAGCAUG GAA G UUAAGAGG     AAAACCUGAA       AAAAA  CCU UAGUA     G                  C UU                  -   G G        --UUU          AAAUUUU     AC   G     -UACC AACGCAUAACAAAUUUAU
Stem-loop sequence	UCCUCACAUUCUUCGUACUCUUGUAAAUUUUUUUGUAUUUUUGGAUUUGCUUUUUUCCGGAAAUCAUUUCACCACUUCCUAAGUGUAACGAACCUAUUUAAACAAUACGCAAGCCAUAUGAUGUCCCAAAAAAUUUUAAAAAGUCCAAAAUUUGGAGAAUUGGGAAGGUACGAAGAAUGUGAGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
FQ395742.1	ncRNA:24   UUAGGAGUGUAAGAAGCAUGGAAG   1   |*||=|||||||||||||||||*= targets:1209   AUUCUUCACAUUCUUCGUACCUAU   1232 Target Full Sequence	2.5	Vitis vinifera clone SS0AFA14YF07	NA	coding protein	psRNATarget