ncRNA ID | novel_vvi_miR437 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:21149880-21150074 [+] |
Reference genome | 12X |
Source | SRR1528356;SRR1528375;SRR1528380 |
Length | 24 |
Mature sequence(if miRNA) | 172 - UGAAGACUGUGAACUUAACUACCU - 195 |
Stem-loop(if miRNA) |
--A            -       GUCUA      GUU   C      CCU        GUACAUAAAAC       CAA            -      G    UGGUUAAGUUCA GGUUUUU     AAGACC   GAC UAACUG   UCAAGUUG           AACUUGA   UAGUUAAGUUCA AGUUUU U    |||||||||||| |||||||     ||||||   ||| ||||||   ||||||||           |||||||   |||||||||||| |||||| C    AUCAAUUCAAGU UCAGAAG     UUUUGG   UUG AUUGAU   AGUUCAAC           UUGAACU   AUCAAUUCAGGU UCAGAA U UCC            G       -UCUG      -AC   A      AAC        AAAAUACAUAU       UCC            G      A |
Stem-loop sequence | AUGGUUAAGUUCAGGUUUUUGUCUAAAGACCGUUGACCUAACUGCCUUCAAGUUGGUACAUAAAACAACUUGACAAUAGUUAAGUUCAAGUUUUGUCUAAAGACUGUGGACUUAACUACCUUCAAGUUUAUACAUAAAACAACUUGACAAUAGUUAAGUUCAGGUUUUGUCUGAAGACUGUGAACUUAACUACCU |