| ncRNA ID | novel_vvi_miR436 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr13:20910332-20910519 [+] |
| Reference genome | 12X |
| Source | SRR1528356 |
| Length | 24 |
| Mature sequence(if miRNA) | 165 - GAGGGUACGAAGAAUAUGAGGAUU - 188 |
| Stem-loop(if miRNA) |
-- C A G G G A C -------GAUUUUUCC AUCAUUCGACCACCUUCUAAGUGUAAC UCCUCA AUUCUUCGUAC CUU U AAUUUUUUA U UUUUUG AUUUU GGAU G |||||| ||||||||||| ||| | ||||||||| | |||||| ||||| |||| A AGGAGU UAAGAAGCAUG GGA G UUAAGAGGU A AGAAAC UGAAA GUAG A UU A - G G G - C AAUUUUACAAAACCCC UAUACCGAAUCUACAACAAAUUUAUCC |
| Stem-loop sequence | UCCUCACAUUCUUCGUACACUUGUGAAUUUUUUAGUAUUUUUGCAUUUUGAUUUUUCCGGAUAUCAUUCGACCACCUUCUAAGUGUAACGAACCUAUUUAAACAACAUCUAAGCCAUAUGAUGCCCCAAAACAUUUUAAAAAGUCCAAAGAAGUGGAGAAUUGGGAGGGUACGAAGAAUAUGAGGAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA173021.1 |
|
2.5 | TSA: Vitis vinifera Locus_4332_Transcript_8/8_Confidence_0.526.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_002269528.4 |
|
2.5 | PREDICTED: Vitis vinifera enhancer of mRNA-decapping protein 4 (LOC100241190), mRNA | NA | coding protein | psRNATarget |