ncRNA ID | novel_vvi_miR435 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:3114889-3115061 [+] |
Reference genome | 12X |
Source | SRR1048204 |
Length | 24 |
Mature sequence(if miRNA) | 150 - GAUGAUAUAUAAGUAUAAACUCCU - 173 |
Stem-loop(if miRNA) |
--A    C           G     GA  C      U      CG  A  A          --         C              U    AGUU AUACUUAUAUA CAUUA  AA UUUCUC CUUAUU  AU UG GAUAUCACAA  AUAUUCUCU AUGCAGACACAACG C    |||| ||||||||||| |||||  || |||||| ||||||  || || ||||||||||  ||||||||| ||||||||||||||    UCAA UAUGAAUAUAU GUAGU  UU AAAGAG GAAUAG  UA AC CUGUAGUGUU  UAUGGGGGA UAUGUCUGUGUUGC C UCC    A           A     AC  A      U      AU  C  C          AG         -              U |
Stem-loop sequence | AAGUUCAUACUUAUAUAGCAUUAGAAACUUUCUCUCUUAUUCGAUAUGAGAUAUCACAAAUAUUCUCUCAUGCAGACACAACGUCCUCGUUGUGUCUGUAUAGGGGGUAUGAUUGUGAUGUCCCACAUUAGAUAAGUGAGAAAAUUCAUGAUGAUAUAUAAGUAUAAACUCCU |