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BaseInfo

ncRNA ID novel_vvi_miR435
Species Vitis vinifera
Class miRNA
Genome position Chr14:3114889-3115061 [+]
Reference genome 12X
Source SRR1048204
Length 24
Mature sequence(if miRNA) 150 - GAUGAUAUAUAAGUAUAAACUCCU - 173
Stem-loop(if miRNA) --A    C           G     GA  C      U      CG  A  A          --         C              U
   AGUU AUACUUAUAUA CAUUA  AA UUUCUC CUUAUU  AU UG GAUAUCACAA  AUAUUCUCU AUGCAGACACAACG C
   |||| ||||||||||| |||||  || |||||| ||||||  || || ||||||||||  ||||||||| ||||||||||||||
   UCAA UAUGAAUAUAU GUAGU  UU AAAGAG GAAUAG  UA AC CUGUAGUGUU  UAUGGGGGA UAUGUCUGUGUUGC C
UCC    A           A     AC  A      U      AU  C  C          AG         -              U
Stem-loop sequence AAGUUCAUACUUAUAUAGCAUUAGAAACUUUCUCUCUUAUUCGAUAUGAGAUAUCACAAAUAUUCUCUCAUGCAGACACAACGUCCUCGUUGUGUCUGUAUAGGGGGUAUGAUUGUGAUGUCCCACAUUAGAUAAGUGAGAAAAUUCAUGAUGAUAUAUAAGUAUAAACUCCU