Search result

BaseInfo

ncRNA ID lus-miR390d
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AAGCUCAGGAGGGAUAGCGCC - NA
Stem-loop(if miRNA)     UC       U U  A          G           UACAAU    -   -  AC
AGUA  AGAAGAA C GU AAGCUCAGGA GGAUAGCGCCA      UCGA UCC UG  C
||||  ||||||| | || |||||||||| |||||||||||      |||| ||| ||
UCGU  UCUUCUU G UA UUUGAGUCCU CCUAUCGCGGU      AGCU AGG AC  U
    --       C C  C          A           UUCACU    U   C  GU
Stem-loop sequence AGUAUCAGAAGAAUCUGUAAAGCUCAGGAGGGAUAGCGCCAUACAAUUCGAUCCUGACCUUGCACGGAUUCGAUCACUUUGGCGCUAUCCAUCCUGAGUUUCAUCGCUUCUUCUUGCU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).