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BaseInfo

ncRNA ID novel_vvi_miR433
Species Vitis vinifera
Class miRNA
Genome position Chr13:1876737-1876874 [+]
Reference genome 12X
Source SRR1528356;SRR1528359;SRR1528361;SRR1528370
Length 24
Mature sequence(if miRNA) 115 - UCACCUGAUGAGUUUUGUGUGCAG - 138
Stem-loop(if miRNA) --          -A    CCU    UUAGU   UAU    CCAAAACGCUUUACAUGCCUAAGUAUUUCUCUU
  GCAUGCAAGA  UAUC   GUGA     GAG   UAUU                                 U
  ||||||||||  ||||   ||||     |||   ||||                                 U
  CGUGUGUUUU  GUAG   CACU     CGU   UAAU                                 U
GA          GA    -UC    ----U   ---    UUUCAUAACUAAACUAUUUUUAUUGUUAACGUC
Stem-loop sequence GCAUGCAAGAAUAUCCCUGUGAUUAGUGAGUAUUAUUCCAAAACGCUUUACAUGCCUAAGUAUUUCUCUUUUUCUGCAAUUGUUAUUUUUAUCAAAUCAAUACUUUUAAUUGCUUCACCUGAUGAGUUUUGUGUGCAG